Safee Ullah Chaudhary, Ph.D. (KAIST)
Assistant Professor, Department of Biology,
Lahore University of Management Sciences (LUMS),
SBASSE, Opposite Sector U, DHA,
Lahore - 54792, Pakistan
Safee Ullah Chaudhary received his Ph.D. in 2013 from the Department of Bio. & Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), South Korea. His research was focused on the computational modelling of multiscale cancer systems biology. He took an agents-based (multi-agent) approach to model tumorigenesis as described in the Warburg Effect. His work also led to the development of Electronic Cancer System (ELECANS), which is a next-generation modelling platform for applications in cancer systems biology. In 2014, he joined the Department of Biology at LUMS where he is involved in the development of a GPU-based cancer modelling and simulation pipeline by leveraging the CUDA Toolkit. He is also keenly interested in investigating the oncological manifestations of the Warburg Effect during cell death.
RESEARCH PUBLICATIONS
[J1] S. U. Chaudhary, S.-Y. Shin, J.-K. Won and K.-H. Cho, “Multi-Scale Modeling of Tumorigenesis Induced by Mitochondrial Incapacitation in Cell Death,” IEEE Transactions on Biomedical Engineering, vol. 58, no. 10, pp. 3028-3032, ISSN 0018-9294, Oct. 2011.
This paper appeared in the Special Issue of IEEE TBME, on “Multi-scale Modeling and Analysis in Computational Biology and Medicine”
[J2] S. U. Chaudhary, S.-Y. Shin, D. W. Lee, J.-H. Song and K.-H. Cho, “ELECANS-An Integrated Model Development Environment for Multiscale Cancer Systems Biology,” Bioinformatics, vol. 29, no. 7, ISSN 1460-2059 (Online) / 1367-4803 (Print), Feb. 2013.
This paper has been selected to appear in the World Biomedical Frontiers, ISSN: 2328-0166, because of its innovation and potential for significant impact.
[J3] F. Ahmad, S. U. Chaudhary, S. Kim, H. W. Park, “A slice-wise latent structure regression method for analysis of functional magnetic resonance imaging data,” Concepts in Magnetic Resonance Part A, vol. 42, no. 4, ISSN 1552-5023, Aug. 2013.
[J4] M. Ahmed, S. U. Chaudhary, A. J. Afzal*, M. Tariq*, "Starvation-Induced Dietary Behaviour in Drosophila melanogaster Larvae and Adults", Scientific Reports (Nature Publishing Group), Vol. 5, No. 14285, Sep. 2015.
EDUCATION
Ph.D. Bio. & Brain Engineering 2008 – 2013
Department of Bio. & Brain Engineering, Korea Advanced Institute of Science and Technology (KAIST), South Korea |
WORK EXPERIENCE
- Lahore University of Management Sciences, Pakistan 2014 – Till Date
Assistant Professor at Department of Biology
- COMSATS Institute of Information Technology, Pakistan 2013 – 2014
Assistant Professor at Department of Computer Science
RESEARCH AREAS
Multi-Agent Virtual Cancer Simulation
Protein Sequence Database Search Engines
Protein Quantization using Liquid Chromatography & Mass Spectrometry